[ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/assertion", "@graph": [ { "@id": "http://purl.org/dc/terms/contributor", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has contributor" } ] }, { "@id": "http://purl.org/dc/terms/creator", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has creator" } ] }, { "@id": "http://purl.org/dc/terms/isPartOf", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is part of" } ] }, { "@id": "http://purl.org/dc/terms/license", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "data usage license" } ] }, { "@id": "http://purl.org/dc/terms/publisher", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has publisher" } ] }, { "@id": "http://purl.org/dc/terms/references", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "references" } ] }, { "@id": "http://purl.org/dc/terms/source", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has source" } ] }, { "@id": "http://purl.org/dc/terms/subject", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has domain" } ] }, { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is a" } ] }, { "@id": "http://www.w3.org/2000/01/rdf-schema#comment", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has description" } ] }, { "@id": "http://www.w3.org/2000/01/rdf-schema#label", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has the label" } ] }, { "@id": "https://creativecommons.org/licenses/by/4.0/", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Attribution 4.0 International (CC BY 4.0)" } ] }, { "@id": "https://doi.org/10.3389/fbinf.2025.1634111", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR² data article (Frontiers in Bioinformatics)" } ] }, { "@id": "https://doi.org/10.71728/hw56-vj34", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR² Data Package DOI" } ] }, { "@id": "https://w3id.org/fair/fip/terms/implements", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "implements" } ] }, { "@id": "https://w3id.org/fdof/ontology#FAIRDigitalObject", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR Digital Object (FDO)" } ] }, { "@id": "https://w3id.org/fdof/ontology#hasEncodingFormat", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has format" } ] }, { "@id": "https://w3id.org/fdof/ontology#hasMetadata", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has its metadata in" } ] }, { "@id": "https://w3id.org/fdof/ontology#materializes", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is a concrete materialization of" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/assertion", "http://purl.org/dc/terms/description": [ { "@value": "Template for the central anchor of a MAC FAIR Digital Twin: a SARS-CoV-2 Spike RBD variant. All observation FDOs (Types 2–8) link back to an instance of this template via mac:isObservationOf. Per SPS v1.3, every instance also declares its institutional context via dct:isPartOf → a Project FDO referent URI (mandatory; instance-supplied via guided-choice from the project catalogue). The nanopublication self-materializes: it is its own access mechanism, in TriG, under CC BY 4.0." } ], "@type": [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Declaring a Spike RBD Variant (MAC FDT Type 1)" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern": [ { "@value": "Spike RBD Variant ${whoVariantName} (${macSeqId})" } ], "https://w3id.org/np/o/ntemplate/hasStatement": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st0" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st1" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st2" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st3" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st4" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5b" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5c" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5d" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st6" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st7" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st8" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st91" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st92" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st95" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_a" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_f2a" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_f2p" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_g" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_m" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_p" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_pp" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_s" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_u" }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_w" } ], "https://w3id.org/np/o/ntemplate/hasTag": [ { "@value": "MAC" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st0", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/fdof/ontology#FAIRDigitalObject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st1", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/label" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/2000/01/rdf-schema#label" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st2", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/description" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/2000/01/rdf-schema#comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st3", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/SpikeRBDVariant" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st4", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#hasMetadata" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#materializes" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5b", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://www.iana.org/assignments/media-types/application/trig" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#hasEncodingFormat" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5c", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/license" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st5d", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://www.w3.org/ns/dcat#accessURL" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st6", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st7", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/contributor" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/contributor" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st8", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/contact" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://www.w3.org/ns/dcat#contactPoint" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st91", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/domain" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st92", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/publisher" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/publisher" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st95", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fip" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fair/fip/terms/implements" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_a", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/gisaidAccession" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasGISAIDAccession" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_f2a", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://doi.org/10.3389/fbinf.2025.1634111" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/references" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_f2p", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://doi.org/10.71728/hw56-vj34" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/source" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_g", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/gisaidSeqId" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasGISAIDSeqId" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_m", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/macSeqId" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasMACSeqId" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_p", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/pangoLineage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasPangoLineage" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_pp", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/project" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/isPartOf" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_s", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/rbdSequence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasRBDSequence" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_u", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://www.uniprot.org/uniprot/P0DTC2" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasParentProtein" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/st_w", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/whoVariantName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasWHOVariantName" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/contact", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "contact email" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/contributor", "@type": [ "https://w3id.org/np/o/ntemplate/AgentPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ORCID of contributor" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/creator", "@type": [ "https://w3id.org/np/o/ntemplate/AgentPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ORCID of creator" } ], "https://w3id.org/np/o/ntemplate/hasDefaultValue": [ { "@id": "https://w3id.org/np/o/ntemplate/CREATOR" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/description", "@type": [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "free-text description of this variant" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/domain", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "domain" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom": [ { "@id": "https://w3id.org/np/RACXDZHEowTYDAzZvdmD0qIGpXZwY5ghMRBBlt6N8Iu5s" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fdo", "@type": [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource", "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "full URI (e.g. handle.net) or short suffix for this variant FDO" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/fip", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR Implementation Profile" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "http://purl.org/nanopub/api/find_signed_things?type=https%3A%2F%2Fw3id.org%2Ffair%2Ffip%2Fterms%2FFAIR-Implementation-Profile&searchterm=" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/gisaidAccession", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "canonical GISAID accession (e.g. \"EPI_ISL_601443\")" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "^EPI_ISL_\\d+$" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/gisaidSeqId", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "GISAID seq_id — full Spike amino-acid notation (e.g. \"N501Y\")" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "^[ACDEFGHIKLMNPQRSTVWY]\\d{1,3}[ACDEFGHIKLMNPQRSTVWY]$" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/label", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "label or name for this variant (e.g. \"Alpha RBD variant (N169Y)\")" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/macSeqId", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "MAC seq_id — RBD amino-acid notation (e.g. \"N169Y\")" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "^[ACDEFGHIKLMNPQRSTVWY]\\d{1,3}[ACDEFGHIKLMNPQRSTVWY]$" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/pangoLineage", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Pango lineage (e.g. \"B.1.1.7\", \"B.1.427 + B.1.429\")" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/project", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "project" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://w3id.org/np/l/nanopub-query-1.1/api/RAFTZ8GqPOOJQOBcEo5IB8lg5vZCFiIyr_RVLKZDQBHMk/get-projects?searchterm=" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/publisher", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ROR of the publishing entity" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/rbdSequence", "@type": [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "RBD amino-acid sequence (one-letter code, 195 residues)" } ], "https://w3id.org/np/o/ntemplate/hasRegex": [ { "@value": "^[ACDEFGHIKLMNPQRSTVWY]{195}$" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/SpikeRBDVariant", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Spike RBD Variant" } ] }, { "@id": "https://www.iana.org/assignments/media-types/application/trig", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "TriG (RDF named-graph serialization)" } ] }, { "@id": "https://www.w3.org/ns/dcat#accessURL", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has access URL" } ] }, { "@id": "https://www.w3.org/ns/dcat#contactPoint", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has contact point" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasGISAIDAccession", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has GISAID accession number" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasGISAIDSeqId", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has GISAID seq_id (full Spike notation)" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasMACSeqId", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has MAC seq_id (RBD notation)" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasPangoLineage", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has Pango lineage" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasRBDSequence", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has RBD amino acid sequence (one-letter code, 195 residues)" } ] }, { "@id": "https://www.uniprot.org/uniprot/P0DTC2", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "wild-type SARS-CoV-2 Spike (UniProt P0DTC2)" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasParentProtein", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has parent protein" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/whoVariantName", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "WHO variant name (e.g. \"Alpha\", \"Epsilon\", \"Eta\")" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasWHOVariantName", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has WHO variant name" } ] } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/pubinfo", "@graph": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM", "http://purl.org/dc/terms/created": [ { "@value": "2026-05-27T09:54:53Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Template: Declaring a Spike RBD Variant (MAC FDT Type 1)" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate": [ { "@id": "https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate": [ { "@id": "https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw" }, { "@id": "https://w3id.org/np/RAMEgudZsQ1bh1fZhfYnkthqH6YSXpghSE_DEN1I-6eAI" }, { "@id": "https://w3id.org/np/RARW4MsFkHuwjycNElvEVtuMjpf4yWDL10-0C5l2MqqRQ" }, { "@id": "https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate": [ { "@id": "https://w3id.org/np/RA5reLVXOCPQFWr2UiCJb19ES7NwOpQRmudb17e2iB0c4" } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD3w/IUb755GIzp3ueODYkgELhyq4Clygb5Kspge50xo+n8uC/IvXwi+ukRjEpdfX/JZ09yKUCJ2AMMr/QchrsP1Xhg9Q3fEZ4E12XqFd5jX00Qs0K5XZwjBaV8NdDTJW9I4gpcyh0cry7hSBAWHkXEkqbK+lQvR4UFAKejFq6u/wIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "vwHiy1TSeI8bbTtTx236cIDuIKyWBWMX9kA12FrWbgTM/qx/K30TaQ7YqEm4jqAVFNFRyr9O0CB1gQiuH1LZHOBwt71JL1iZHOkrVi8M+aKXGYPVsJtk2e4drJTyQ1CH/H6/0CUsy+rCO4jdm0fbwElM46zHlbve4P0A7qMQ5M0=" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ] } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/Head", "@graph": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] }, { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/provenance", "@graph": [ { "@id": "https://w3id.org/np/RADOnITa1gjGIQtuENvlB2I7hykzrASzake1bIjGLiAtM/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ] } ] } ]