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png(paste(sp[k],'.png'),height=1000,width=750)\n par(cex=3,mfrow=c(3,3),lwd=2,mar=c(4,5,4,6))\n pel_data<-invasive[invasive$species==sp[k],]\n pel_data$year<-as.numeric(pel_data$year)\n coordinates(pel_data)<-c('x.long','y.lat')\n m<-c(2009,2010,2011,2012,2013,2014,2015)\n for(i in 1:length(m)){\n if(TRUE%in%(pel_data$year<=m[i]&pel_data$year<=m[i])){\n pel_dataz<-pel_data[pel_data$year<=m[i]&pel_data$year<=m[i],]\n rasta<-raster(ext=extent(pel_data)*1.1,res=.33)\n rasta_fari<-rasterize(pel_dataz,rasta,field='species',fun=\"count\",zlim=c(0,2))\n }\n else rasta_fari<-raster(ext=extent(pel_data)*1.1,res=.33,vals=0)\n plot(log10(rasta_fari),main=paste('Year',m[i]),\n col=rev(heat.colors(20)),cex.main=2,xaxt='n',yaxt='n',legend.mar=10,legend.shrink =.95,legend.width=1.5,\n legend.args=list(text='log10(Number of blooms)',cex=.75,side=4,font=2,line=3.25))\n map(add=T,col='grey',fill=T)\n }\n dev.off()\n}" } ], "http://purl.org/wf4ever/wfdesc#hasInput": [ { "@id": 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In aquatic ecosystems, bioinvasions may cause\r\nadverse effects on the water quality resulting from\r\nchanges in biological, chemical and physical proper-\r\nties linked to significant transformations of the\r\nmicrobial taxonomic and functional diversity. Here\r\nwe used an effective and highly sensitive experimental\r\nstrategy, bypassing the efficiency bottleneck of the\r\ntraditional bacterial isolation and culturing method, to\r\nidentify changes of the planktonic microbial commu-\r\nnity inhabiting a marine coastal lagoon (Varano,\r\nAdriatic Sea) under the influence of an outbreak-\r\nforming alien jellyfish species. Water samples were\r\ncollected from two areas that differed in their level of\r\nconfinement inside in the lagoon and jellyfish densities\r\n(W, up to 12.4 medusae m\r\n-\r\n3\r\n; E, up to 0.03 medusae\r\nm\r\n-\r\n3\r\n) to conduct a snapshot microbiome analysis by a\r\nmetagenomic approach. After extraction of the genetic\r\nmaterial in the environmental water samples, we deep-\r\nsequenced metagenomic amplicons of the V5–V6\r\nregion of the 16S rRNA bacterial gene by an Illumina\r\nMiSeq platform" } ], "http://schema.org/name": [ { "@value": "The influence of invasive jellyfish blooms on the aquatic microbiome in a coastal lagoon (Varano, SE Italy) detected by an Illumina-based deep sequencing strategy" } ], "@type": [ "http://purl.org/dc/terms/BibliographicResource", "http://schema.org/Object" ] }, { "@id": "http://w3id.org/ro-id/rohub/model#subject/-1696265119", "@type": [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel": [ { "@value": "elaborate data" } ] }, { "@id": "http://w3id.org/ro-id/rohub/model#subject/-1927494312", "@type": [ "https://w3id.org/contentdesc#Expression" ], "http://www.w3.org/2004/02/skos/core#prefLabel": [ { "@value": "accord with MSF directive descriptor" } ] }, { "@id": 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"https://w3id.org/ro-id/05a30007-abe3-4304-b26d-06962207456c/", "http://purl.org/pav/importedBy": [ { "@id": "mailto:service-account-generation-service" } ], "http://schema.org/author": [ { "@id": "http://ffoglini.livejournal.com/" } ], "http://schema.org/contentSize": [ { "@value": "63580441", "@type": "http://www.w3.org/2001/XMLSchema#integer" } ], "http://schema.org/contentUrl": [ { "@value": "https://api.rohub.org/api/ros/05a30007-abe3-4304-b26d-06962207456c/crate/download/" } ], "http://schema.org/creator": [ { "@id": "http://ffoglini.livejournal.com/" } ], "http://schema.org/dateCreated": [ { "@value": "2016-07-04 14:17:38.590000+00:00" } ], "http://schema.org/dateModified": [ { "@value": "2025-10-20 10:41:06.375511+00:00" } ], "http://schema.org/datePublished": [ { "@value": "2016-07-04 14:17:38.590000+00:00" } ], "http://schema.org/description": [ { "@value": "Starting from Jellyfish sightings, we elaborate data to produce explicit geographical information concerning trend 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Anecdotal evidence suggests that these blooms have had a considerable impact on fishing operations, as this region is one of the most heavily exploited Mediterranean fishing grounds. In order to gain a better understanding of the possible economic losses for the Italian NA fishing industry due to jellyfish impacts, we conducted a survey of fishermen in the city of Chioggia, which is the main fishing port for the NA basin. The study focused on fishermen's perceptions about jellyfish blooms in the NA Sea and also investigated whether and how blooms compromised fishing operations. Survey results confirm that blooms have negatively affected fishing operations in the last few decades. We estimate that economic losses due to reduction in fish catches could amount to as much as (sic) 8.2 million per year for the Italian NA trawling fleet. Other costs on this fleet include additional fuel costs due to displacement of fishing operations, which could represent an increase in costs of over (sic) 460,000 per year. Moreover, during a jellyfish bloom episode it can happen that time has to be spent by fishermen to repair nets damaged by jellyfish caught in them, leading to an estimated cost for the trawling fleet and small scale fisheries of over 89,000 man-hours per year. 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