. . . . "" . "Life sciences" . . . "https://asreview.nl/" . . "2025-12-27 20:18:46.006779+00:00" . "2025-12-27 20:18:46.748331+00:00" . "AI-assisted systematic review screening tool" . . "ASReview LAB v2.2" . "2025-12-27 20:18:46.006779+00:00" . . . . . "https://doi.org/10.1136/bmj.n71" . . "2025-12-29 13:49:18.378333+00:00" . "2025-12-29 13:49:19.090463+00:00" . "The Preferred Reporting Items for Systematic reviews and Meta-Analyses (PRISMA) statement, published in 2009, was designed to help systematic reviewers transparently report why the review was done, what the authors did, and what they found. Over the past decade, advances in systematic review methodology and terminology have necessitated an update to the guideline. The PRISMA 2020 statement replaces the 2009 statement and includes new reporting guidance that reflects advances in methods to identify, select, appraise, and synthesise studies. The structure and presentation of the items have been modified to facilitate implementation. In this article, we present the PRISMA 2020 27-item checklist, an expanded checklist that details reporting recommendations for each item, the PRISMA 2020 abstract checklist, and the revised flow diagrams for original and updated reviews." . . "The PRISMA 2020 statement: an updated guideline for reporting systematic reviews" . "2025-12-29 13:49:18.378333+00:00" . . . . . "https://doi.org/10.5281/zenodo.18070377" . . "2025-12-27 20:19:29.530182+00:00" . "2025-12-29 20:35:05.913407+00:00" . "Complete dataset including search results, ASReview project, screening decisions, and nanopub URIs. DOI: 10.5281/zenodo.18070378" . . "Systematic Review Dataset - Zenodo" . "2025-12-27 20:19:29.530182+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline" . . "2025-12-27 20:19:30.824807+00:00" . "2025-12-27 20:23:11.216634+00:00" . "Source code repository containing all Jupyter notebooks, configuration templates, and documentation" . . "Systematic Review Pipeline - GitHub Repository" . "2025-12-27 20:19:30.824807+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/inputs/quantum-biodiversity/pico-quantum-biodiversity.json" . . "2025-12-27 20:18:17.913600+00:00" . "2025-12-28 15:54:46.796468+00:00" . "JSON configuration for quantum computing + biodiversity PICO question" . "application/json" . . "PICO Configuration" . "2025-12-27 20:18:17.913600+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/inputs/quantum-biodiversity/search-execution-quantum-biodiversity.json" . . "2025-12-27 20:18:33.107854+00:00" . "2025-12-28 15:56:06.224813+00:00" . "JSON configuration with API endpoints and result counts" . "application/json" . . "Search Execution Configuration" . "2025-12-27 20:18:33.107854+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/inputs/quantum-biodiversity/search-strategy-quantum-biodiversity.json" . . "2025-12-27 20:18:24.605191+00:00" . "2025-12-28 15:55:16.275118+00:00" . "JSON configuration with search terms, databases, and date ranges" . "application/json" . . "Search Strategy Configuration" . "2025-12-27 20:18:24.605191+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/inputs/quantum-biodiversity/study-assessment-quantum-biodiversity.json" . . "2025-12-27 20:18:54.656235+00:00" . "2025-12-30 09:17:31.394335+00:00" . "JSON with study characteristics and quality assessment" . "application/json" . . "Study Assessment Configuration" . "2025-12-27 20:18:54.656235+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/asreview-to-nanopub.ipynb" . . "2025-12-27 20:18:39.646664+00:00" . "2025-12-28 15:56:38.085081+00:00" . "Extracts screening decisions from ASReview project file" . . "ASReview Export to Nanopub" . "2025-12-27 20:18:39.646664+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/database-search-nanopubs.ipynb" . . "2025-12-29 19:42:12.362288+00:00" . "2025-12-29 19:42:13.080219+00:00" . "Create of a nanopublication for storing the results of a bibliography search. A nanopublication is created for each database search." . . "PRISMA Database Search Nanopublications" . "2025-12-29 19:42:12.362288+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/pico-nanopub-from-json.ipynb" . . "2025-12-27 20:18:15.715938+00:00" . "2025-12-28 15:54:20.949348+00:00" . "Generates PICO research question nanopublication from JSON config" . . "PICO Nanopub Generator" . "2025-12-27 20:18:15.715938+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/search-execution-api-queries.ipynb" . . "2025-12-27 20:18:28.872086+00:00" . "2025-12-28 15:55:33.585290+00:00" . "Queries OpenAlex, arXiv, PubMed, Europe PMC, Semantic Scholar APIs" . . "Search Execution - API Queries" . "2025-12-27 20:18:28.872086+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/search-execution-nanopub-from-json.ipynb" . . "2025-12-27 20:18:30.964263+00:00" . "2025-12-28 15:55:54.942706+00:00" . "Generates search execution dataset nanopublication" . . "Search Execution Nanopub Generator" . "2025-12-27 20:18:30.964263+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/search-strategy-nanopub-from-json.ipynb" . . "2025-12-27 20:18:22.497310+00:00" . "2025-12-28 15:55:06.338250+00:00" . "Generates search strategy nanopublication with Boolean queries" . . "Search Strategy Nanopub Generator" . "2025-12-27 20:18:22.497310+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/study-assessment-nanopub-from-json.ipynb" . . "2025-12-27 20:18:52.499249+00:00" . "2025-12-30 09:17:07.137288+00:00" . "Generates study assessment dataset nanopublication" . . "Study Assessment Nanopub Generator" . "2025-12-27 20:18:52.499249+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/notebooks/study-inclusion-nanopub-asreview.ipynb" . . "2025-12-27 20:18:48.208829+00:00" . "2025-12-28 15:57:18.333484+00:00" . "Generates individual nanopubs for each included/excluded study" . . "Study Inclusion Nanopub Generator" . "2025-12-27 20:18:48.208829+00:00" . . . . . "https://github.com/FAIR2Adapt/systematic-review-pipeline/blob/main/requirements.txt" . . "2025-12-27 20:19:32.004249+00:00" . "2025-12-27 20:23:28.849828+00:00" . "Python package dependencies: pandas, numpy, requests, rdflib, nanopub, asreview, jupyter" . "text/plain" . . "requirements.txt" . "2025-12-27 20:19:32.004249+00:00" . . . . "Simula Research Laboratory" . "annef@simula.no" . "Anne Fouilloux" . . . "0000-0002-1784-2920" . . "https://raw.githubusercontent.com/FAIR2Adapt/systematic-review-pipeline/refs/heads/main/Quantum-and-Biodiversity-Perplexity.png" . . "2025-12-29 15:46:22.541340+00:00" . "2025-12-29 15:57:44.661899+00:00" . "Illustration of Quantum Computingfor Biodiversity. This illustration was generated by Perplexity.ai on 29th December 2025." . "image/png" . "ai-generated" . . "Quantum Computing applied to Biodiversity" . "2025-12-29 15:46:22.541340+00:00" . . . . "04c04g438" . "LifeWatch ERIC" . . . . "https://w3id.org/np/RAJW9kn9Syx7y_1Okl4HPwqUlUssxi0daadJNM1AT8-PU" . . "2025-12-27 20:18:26.730521+00:00" . "2025-12-27 20:18:27.450626+00:00" . "Published nanopub documenting the search strategy" . . "Search Strategy Nanopublication" . "2025-12-27 20:18:26.730521+00:00" . . . . . "https://w3id.org/np/RASr_5SP0NhXfz43auGCrxon4_kUUj0AfA56gW13Yfqak" . . "2025-12-27 20:18:20.280170+00:00" . "2025-12-29 15:49:50.022727+00:00" . "Published nanopub defining the research question" . . "PICO Nanopublication" . "2025-12-27 20:18:20.280170+00:00" . . . . . "https://w3id.org/np/RAhFlAUVte1zioZDIBXyg6GdSziwLxgqwxPkDi7v110WU" . . "2025-12-27 20:18:35.263368+00:00" . "2025-12-29 19:14:15.467721+00:00" . "Published nanopub with search execution metadata" . . "Search Execution Nanopublication" . "2025-12-27 20:18:35.263368+00:00" . . . . . "https://w3id.org/np/RAlN5rGFTlXawYWAMdSDMm2SfTh8mfsN9Jhx-Oh7yXR-4" . . "2025-12-27 20:18:56.771035+00:00" . "2025-12-30 09:25:09.003318+00:00" . "Published nanopub with aggregated study characteristics" . . "Study Assessment Nanopublication" . "2025-12-27 20:18:56.771035+00:00" . . . . . . "0"^^ . "https://api.rohub.org/api/ros/b6e01d7a-9f25-4b37-82df-32ef2e7171e3/crate/download/" . . . "2025-12-27 20:03:25.858398+00:00" . "2026-01-26 10:09:47.582777+00:00" . "2025-12-27 20:03:25.858398+00:00" . "A PRISMA-compliant scoping review investigating applications of quantum computing \nin biodiversity and ecological research. This Research Object contains the complete reproducible \nworkflow from research question to study assessment, implemented as a pipeline of Jupyter notebooks \nwith nanopublication outputs for transparent, machine-readable documentation.\n\nScreening: 1,649 records → 569 screened → 283 included → 238 nanopubs published." . "application/ld+json" . . . . . . . . . . . . "https://w3id.org/ro-id/b6e01d7a-9f25-4b37-82df-32ef2e7171e3" . "ASReview" . "PRISMA" . "active learning" . "biodiversity" . "nanopublications" . "quantum computing" . "reproducible research" . "scoping review" . "systematic review" . . "Research Question" . "Quantum Computing Applications in Biodiversity Research - Scoping Review" . . "MANUAL" . . . . . "https://w3id.org/ro/terms/earth-science#BibliographyCentricResearchObjectTemplate" . "Fouilloux, Anne. \"Quantum Computing Applications in Biodiversity Research - Scoping Review.\" ROHub. Dec 27 ,2025. https://w3id.org/ro-id/b6e01d7a-9f25-4b37-82df-32ef2e7171e3." . "API queries and search result aggregation" . . . . . . . "3-search-execution" . . . . "biblio" . . . "Search strategy with Boolean operators and database selection" . . . . "2-search-strategy" . . . "AI-assisted screening with ASReview LAB" . . . . . "4-screening" . . . "Study characteristics and quality assessment" . . . . "5b-study-assessment" . . . "Included/excluded study nanopublications" . . . "5a-study-inclusion" . . . "PICO framework research question definition" . . . . "1-pico-research-question" . . . . . . . "https://zenodo.org/records/18070378/files/included_studies.csv" . . "2025-12-27 20:18:37.421635+00:00" . "2025-12-27 20:18:38.184563+00:00" . "Aggregated search results from all databases" . "text/csv" . . "Search Results CSV" . "2025-12-27 20:18:37.421635+00:00" . . . . . "https://zenodo.org/records/18070378/files/search_results_combined.asreview" . . "2025-12-27 20:18:41.777731+00:00" . "2025-12-27 20:18:42.474928+00:00" . "ASReview LAB project with screening decisions" . . "ASReview Project File" . "2025-12-27 20:18:41.777731+00:00" . . . . . "https://zenodo.org/records/18070378/files/study_inclusion.json" . . "2025-12-27 20:18:43.877924+00:00" . "2025-12-27 20:18:44.598993+00:00" . "Extracted inclusion/exclusion decisions with reasons" . "application/json" . . "Screening Decisions JSON" . "2025-12-27 20:18:43.877924+00:00" . . . . . "https://zenodo.org/records/18070686/files/published_uris_updated.json" . . "2025-12-27 20:18:50.315296+00:00" . "2025-12-29 20:38:18.771481+00:00" . "Index of all published study inclusion nanopublications" . "application/json" . . "Published Nanopub URIs (238 studies)" . "2025-12-27 20:18:50.315296+00:00" . . . . . "2026-03-03T15:05:53.953+01:00"^^ . . . . "Quantum Computing Applications in Biodiversity Research - Scoping Review" . "RSA" . "MIIBIjANBgkqhkiG9w0BAQEFAAOCAQ8AMIIBCgKCAQEAxszSDYX5tuCSkP7UiCtftYPFNQVTjgNu0I5fwdML2DLRDlp0xzmsQXRk8oHuvwGvG1aMjj6cpUqO+0rz2Sg/wvHOgUpkRH8VJXvmlkhafMLCMtUtk5JIx7e+fkzCby+fnmD7kMkGLrT+OaExWwEDmNlCAt0TPKcHSdwsjso2isXjtAsGevyCMke8ufnFYpjs746JES1eNzVnHnn2Kp/lqcm60GM+J8dLgRZp7fX0anW098xhKym6+xXFzqeju0vYRIHBPerv+r7skWxwk+a7Sd8msqVeYEv6NTqnyWvyWb6Yh8cvj04N6qm/T6C5FUPLQhzSaQgMVMU6yLqjPuu9DwIDAQAB" . "JrPJe/r15uvAb7abDvGNHrrrFfAdDH6+H8oW/5G6Vez0Ja4eeVQ+QmGu8exit4WVstVn1OdPcBYQeS0/R+TPiGOHsN8NRrPKcASTtZKpceFuzspSd/MgqTntDmL7UgXF9YnIlL1moDRKUJsWVJyooH/NqpjjkiQ8YYVyLFgvxDJgyqvytS48BKr+2zLqNs/bHpJGwD5DUqMqWaMqq96Ty2rInUzv5o4xf5TbUmiZNVCAOsgmLiItQC6cGvr1vsh/yxnGpVAl/691wk9kUghmrRG7u9rWD/mQ6QnMco/Je/ZeLYgrv0ksjmm9mvHcDISpHvU7bn1NPKYaiMU89VObaQ==" . . .