[ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/provenance", "@graph": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/assertion", "http://www.w3.org/ns/prov#wasAttributedTo": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ] } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/pubinfo", "@graph": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0", "http://purl.org/dc/terms/created": [ { "@value": "2026-05-27T20:27:36Z", "@type": "http://www.w3.org/2001/XMLSchema#dateTime" } ], "http://purl.org/dc/terms/creator": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ], "http://purl.org/dc/terms/license": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Template: Declaring a Computational Prediction — AgMata (MAC FDT Type 6)" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromProvenanceTemplate": [ { "@id": "https://w3id.org/np/RA7lSq6MuK_TIC6JMSHvLtee3lpLoZDOqLJCLXevnrPoU" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromPubinfoTemplate": [ { "@id": "https://w3id.org/np/RA0J4vUn_dekg-U1kK3AOEt02p9mT2WO03uGxLDec1jLw" }, { "@id": "https://w3id.org/np/RAMEgudZsQ1bh1fZhfYnkthqH6YSXpghSE_DEN1I-6eAI" }, { "@id": "https://w3id.org/np/RARW4MsFkHuwjycNElvEVtuMjpf4yWDL10-0C5l2MqqRQ" }, { "@id": "https://w3id.org/np/RAukAcWHRDlkqxk7H2XNSegc1WnHI569INvNr-xdptDGI" } ], "https://w3id.org/np/o/ntemplate/wasCreatedFromTemplate": [ { "@id": "https://w3id.org/np/RA5reLVXOCPQFWr2UiCJb19ES7NwOpQRmudb17e2iB0c4" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/sig", "http://purl.org/nanopub/x/hasAlgorithm": [ { "@value": "RSA" } ], "http://purl.org/nanopub/x/hasPublicKey": [ { "@value": "MIGfMA0GCSqGSIb3DQEBAQUAA4GNADCBiQKBgQD3w/IUb755GIzp3ueODYkgELhyq4Clygb5Kspge50xo+n8uC/IvXwi+ukRjEpdfX/JZ09yKUCJ2AMMr/QchrsP1Xhg9Q3fEZ4E12XqFd5jX00Qs0K5XZwjBaV8NdDTJW9I4gpcyh0cry7hSBAWHkXEkqbK+lQvR4UFAKejFq6u/wIDAQAB" } ], "http://purl.org/nanopub/x/hasSignature": [ { "@value": "LyvrV7JyQmDlAPFMFemnERvMYb3a1n79VQPE9J9QTXg4BlQzt+RW43OPEhLgvauft8EURbjITm3x8B2UAauCjBwdrH3o8VBDIFM2tp0c6e6UiFPeV4wJD594CrdoNDi6Hu58hrohJnXg98rpYYxuMjqGJfv5VSzYhPRmB+nOkvY=" } ], "http://purl.org/nanopub/x/hasSignatureTarget": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0" } ], "http://purl.org/nanopub/x/signedBy": [ { "@id": "https://orcid.org/0000-0001-8888-635X" } ] } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/assertion", "@graph": [ { "@id": "http://purl.org/dc/terms/contributor", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has contributor" } ] }, { "@id": "http://purl.org/dc/terms/creator", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has creator" } ] }, { "@id": "http://purl.org/dc/terms/isPartOf", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is part of" } ] }, { "@id": "http://purl.org/dc/terms/license", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "data usage license" } ] }, { "@id": "http://purl.org/dc/terms/publisher", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has publisher" } ] }, { "@id": "http://purl.org/dc/terms/references", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "references" } ] }, { "@id": "http://purl.org/dc/terms/source", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has source" } ] }, { "@id": "http://purl.org/dc/terms/subject", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has domain" } ] }, { "@id": "http://purl.org/spar/cito/citesAsAuthority", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "cites as authority" } ] }, { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is a" } ] }, { "@id": "http://www.w3.org/2000/01/rdf-schema#comment", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has description" } ] }, { "@id": "http://www.w3.org/2000/01/rdf-schema#label", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has the label" } ] }, { "@id": "https://creativecommons.org/licenses/by/4.0/", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Attribution 4.0 International (CC BY 4.0)" } ] }, { "@id": "https://doi.org/10.3389/fbinf.2025.1634111", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR² data article (Frontiers in Bioinformatics)" } ] }, { "@id": "https://doi.org/10.71728/hw56-vj34", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR² Data Package DOI" } ] }, { "@id": "https://w3id.org/fair/fip/terms/implements", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "implements" } ] }, { "@id": "https://w3id.org/fdof/ontology#FAIRDigitalObject", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR Digital Object (FDO)" } ] }, { "@id": "https://w3id.org/fdof/ontology#hasEncodingFormat", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has format" } ] }, { "@id": "https://w3id.org/fdof/ontology#hasMetadata", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has its metadata in" } ] }, { "@id": "https://w3id.org/fdof/ontology#materializes", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is a concrete materialization of" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/assertion", "http://purl.org/dc/terms/description": [ { "@value": "Computational prediction of the AgMata aggregation propensity score (unitless) of a SARS-CoV-2 Spike RBD variant, produced by the Bio2Byte AgMata predictor. Sequence-derived: one FDO per variant. Links via mac:isObservationOf to the variant FDO it observes and via mac:hasPredictionMethod to the Bio2Byte Computational Method FDO (Type 9). The nanopublication self-materializes (assertion graph is the FDO)." } ], "@type": [ "https://w3id.org/np/o/ntemplate/AssertionTemplate" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Declaring a Computational Prediction — AgMata (MAC FDT Type 6)" } ], "https://w3id.org/np/o/ntemplate/hasNanopubLabelPattern": [ { "@value": "AgMata = ${value}" } ], "https://w3id.org/np/o/ntemplate/hasStatement": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st0" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st1" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st2" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st3" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st4" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5b" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5c" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5d" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st6" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st7" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st8" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st91" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st92" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st95" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_obs" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_oc" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_pm" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_pp" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_src" }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_val" } ], "https://w3id.org/np/o/ntemplate/hasTag": [ { "@value": "MAC" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st0", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/fdof/ontology#FAIRDigitalObject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st1", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/label" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/2000/01/rdf-schema#label" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st2", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/description" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/2000/01/rdf-schema#comment" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st3", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/ComputationalPredictionAgMata" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://www.w3.org/1999/02/22-rdf-syntax-ns#type" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st4", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#hasMetadata" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#materializes" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5b", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://www.iana.org/assignments/media-types/application/trig" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fdof/ontology#hasEncodingFormat" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5c", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://creativecommons.org/licenses/by/4.0/" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/license" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st5d", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://www.w3.org/ns/dcat#accessURL" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/o/ntemplate/NANOPUB" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st6", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/creator" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st7", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/contributor" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/contributor" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st8", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/contact" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://www.w3.org/ns/dcat#contactPoint" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st91", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/domain" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/subject" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st92", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/publisher" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/publisher" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st95", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fip" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/fair/fip/terms/implements" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_obs", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/variant" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/isObservationOf" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_oc", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/authority" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/spar/cito/citesAsAuthority" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/OptionalStatement", "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_pm", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/predictionMethod" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasPredictionMethod" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_pp", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/project" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/isPartOf" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_src", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/source" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "http://purl.org/dc/terms/source" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ], "@type": [ "https://w3id.org/np/o/ntemplate/RepeatableStatement" ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/st_val", "http://www.w3.org/1999/02/22-rdf-syntax-ns#object": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/value" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#predicate": [ { "@id": "https://w3id.org/spaces/mac/r/ontology/hasAgMataScore" } ], "http://www.w3.org/1999/02/22-rdf-syntax-ns#subject": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/authority", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "observation-specific authority (DOI or URL)" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/contact", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "contact email" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/contributor", "@type": [ "https://w3id.org/np/o/ntemplate/AgentPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ORCID of contributor" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/creator", "@type": [ "https://w3id.org/np/o/ntemplate/AgentPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ORCID of creator" } ], "https://w3id.org/np/o/ntemplate/hasDefaultValue": [ { "@id": "https://w3id.org/np/o/ntemplate/CREATOR" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/description", "@type": [ "https://w3id.org/np/o/ntemplate/LongLiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "free-text description of this AgMata observation" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/domain", "@type": [ "https://w3id.org/np/o/ntemplate/RestrictedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "domain" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFrom": [ { "@id": "https://w3id.org/np/RACXDZHEowTYDAzZvdmD0qIGpXZwY5ghMRBBlt6N8Iu5s" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fdo", "@type": [ "https://w3id.org/np/o/ntemplate/IntroducedResource", "https://w3id.org/np/o/ntemplate/LocalResource", "https://w3id.org/np/o/ntemplate/UriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "full URI or short suffix for this AgMata observation FDO" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/fip", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR Implementation Profile" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "http://purl.org/nanopub/api/find_signed_things?type=https%3A%2F%2Fw3id.org%2Ffair%2Ffip%2Fterms%2FFAIR-Implementation-Profile&searchterm=" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/label", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "label for this observation (e.g. \"Alpha AgMata\")" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/predictionMethod", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Computational Method FDO referent URI (Bio2Byte AgMata, Type 9)" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/project", "@type": [ "https://w3id.org/np/o/ntemplate/GuidedChoicePlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "project" } ], "https://w3id.org/np/o/ntemplate/possibleValuesFromApi": [ { "@value": "https://w3id.org/np/l/nanopub-query-1.1/api/RAFTZ8GqPOOJQOBcEo5IB8lg5vZCFiIyr_RVLKZDQBHMk/get-projects?searchterm=" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/publisher", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "ROR of the publishing entity" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/source", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "FAIR² Package DOI or FAIR² ESM resource URL or OSF URL" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/ComputationalPredictionAgMata", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Computational Prediction — AgMata" } ] }, { "@id": "https://www.iana.org/assignments/media-types/application/trig", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "TriG (RDF named-graph serialization)" } ] }, { "@id": "https://www.w3.org/ns/dcat#accessURL", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has access URL" } ] }, { "@id": "https://www.w3.org/ns/dcat#contactPoint", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has contact point" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/variant", "@type": [ "https://w3id.org/np/o/ntemplate/ExternalUriPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "Spike RBD Variant FDO referent URI" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/isObservationOf", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "is observation of" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasPredictionMethod", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has prediction method" } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/value", "@type": [ "https://w3id.org/np/o/ntemplate/LiteralPlaceholder" ], "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "AgMata score (unitless)" } ] }, { "@id": "https://w3id.org/spaces/mac/r/ontology/hasAgMataScore", "http://www.w3.org/2000/01/rdf-schema#label": [ { "@value": "has AgMata score (aggregation propensity)" } ] } ] }, { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/Head", "@graph": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0", "http://www.nanopub.org/nschema#hasAssertion": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/assertion" } ], "http://www.nanopub.org/nschema#hasProvenance": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/provenance" } ], "http://www.nanopub.org/nschema#hasPublicationInfo": [ { "@id": "https://w3id.org/np/RAuCu_OnyqK_dlaJ9l1EDdbtu_Wbpdw2pTlcTimQ9mqV0/pubinfo" } ], "@type": [ "http://www.nanopub.org/nschema#Nanopublication" ] } ] } ]